<scp>MLLPA</scp> : A Machine Learning‐assisted Python module to study phase‐specific events in lipid membranes
نویسندگان
چکیده
Machine Learning-assisted Lipid Phase Analysis (MLLPA) is a new Python 3 module developed to analyze phase domains in lipid membrane based on molecular states. Reading standard simulation coordinate and trajectory files, the software first composition of by using machine learning tools label each individual molecules with respect their state, then decompose box Voronoi tessellations local environment all interest. MLLPA versatile as it can read from multiple format (e.g., GROMACS, LAMMPS) either all-atom CHARMM36) or coarse-grain models Martini). It also geometries membranes bilayers, vesicles). Finally, allows for training more than two phases, allowing coexistence analysis.
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ژورنال
عنوان ژورنال: Journal of Computational Chemistry
سال: 2021
ISSN: ['0192-8651', '1096-987X']
DOI: https://doi.org/10.1002/jcc.26508